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<\/a> didier.casane[@]gmail.com<\/p>\nTh\u00e8mes de Recherche<\/h2>\n
G\u00e9nomique et \u00e9volution des syst\u00e8mes sensoriels<\/h3>\n
\u00c9volution de l’olfaction et de la gustation chez les vert\u00e9br\u00e9s et les insectes<\/div>\n\u00c9volution des syst\u00e8mes sensoriels chez les poissons cavernicoles<\/div>\nG\u00e9n\u00e9tique des populations, d\u00e9mographie et conservation<\/h3>\n
Suivi de populations cavernicoles d’Astyanax mexicanus<\/em>.<\/div>\nDans le cadre d’un projet de science participative, suivi de populations de panth\u00e8res des neiges Panthera uncia<\/em> en collaboration avec l’ONG OSI<\/a><\/strong>.<\/div>\n<\/h2>\n
Enseignement et diffusion des connaissances<\/h2>\n
Quelque soit votre formation initiale en biologie, et si vous souhaitez comprendre ce que sont nos connaissances actuelles sur l’\u00e9volution des esp\u00e8ces et les implications sur notre sant\u00e9 et les progr\u00e8s de la m\u00e9decine, je vous invite \u00e0 suivre le cycle \u00ab\u00a0Evolution de l\u2019Humanit\u00e9, changements environnementaux et maladies \u00e9mergentes\u00a0\u00bb<\/a>, ouvert \u00e0 tout public, dans le cadre de \u00ab\u00a0l’Universit\u00e9 ouverte\u00a0\u00bb<\/a> \u00e0 l’Universit\u00e9 Paris Cit\u00e9.<\/div>\n<\/h2>\n
Voir aussi :<\/div>\nL’\u00e9mission de radio de France Culture \u00ab La Science, CQFD \u00bb , Evolution : histoire de l\u2019\u0153il<\/a>, 11 novembre 2025<\/div>\nL’\u00e9mission de la Web TV \u00ab La tronche en biais \u00bb : L\u2019ADN poubelle<\/a>, 22 avril 2025<\/div>\n<\/h2>\n
Des articles de vulgarisation scientifique portant sur des questions relatives \u00e0 l’\u00e9volution et publi\u00e9s dans M\u00e9decine\/Sciences sont disponibles ici <\/a><\/div>\n<\/h2>\n
Pour plus d’informations sur ma bibliom\u00e9trie et mon r\u00e9seau de collaboration<\/h2>\n
Voir sur ResearchGate<\/a> et Scholar Google<\/a><\/h3>\n
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Publications<\/h2>\n
![\"iconePdf\"](\"http:\/\/www.egce.cnrs-gif.fr\/wp-content\/uploads\/2014\/02\/iconePdf.png\")
<\/a> 78 – <\/strong>Legendre L., Rode J., Germon I., Pavie M., P\u00e8re S., Fumey J., Policarpo M., Espinasa L., Casane D. and R\u00e9taux S. (2026)<\/strong> Long-term genetic mark and recapture in Astyanax mexicanus<\/em> cave populations: demographic inferences and conservation issues. Conservation Genetics<\/em> 27(1):24
\n<\/a> 77 – <\/strong>Brownstein C.D., Policarpo M., Harrington R.C., Hoffman E.A., Stokes M.F., Casane D.<\/strong> and Near T.J. (2025)<\/strong> Convergent Evolution in Amblyopsid Cavefishes and the Age of Eastern North American Subterranean Ecosystems. Molecular Biology and Evolution<\/em> 42(8):msaf185
\n<\/a> 76 – <\/strong> Rode J., Cabanat A.-L., Pelletier A., Kaerle C., Queney G., Chaix B., Vereshagin A. and Casane D.<\/strong> (2024)<\/strong> Monitoring of snow leopards in the Sarychat-Ertash State Reserve (Kyrgyzstan), between 2011 and 2019, through scat genotyping. Snow Leopard Reports<\/em> 3:1
\n<\/a> 75 – <\/strong> Policarpo M., Legendre L., Germon I., Lafargeas P., Espinasa L., R\u00e9taux S. and Casane D.<\/strong> (2024)<\/strong> The nature and distribution of non-functional alleles suggest only two independent events at the origins of Astyanax mexicanus<\/em> cavefish populations. BMC Ecology and Evolution<\/em> 24(1):41
\n<\/a> 74 – <\/strong> Policarpo M., Baldwin M., Casane D.<\/strong> and Salzburger W. (2024)<\/strong> Diversity and evolution of the vertebrate chemoreceptor gene repertoire. Nature communications<\/em> 15:1421
\n<\/a> 73 – <\/strong> Rodr\u00edguez-Machado S., Ponce de Le\u00f3n J.L., Germon I., Casane D.<\/strong> and Garc\u00eda-Machado E. (2023)<\/strong> Phylogeography of Limia vittata<\/em> (Cyprinodontiformes: Poeciliidae): geographical distribution of mitochondrial haplotypes is comparable to other Cuban poeciliids. Biological Journal of the Linnean Society<\/em> 140(3): 459-470
\n<\/a> 72 – <\/strong> Hyacinthe C., Attia J., Schutz E., Lego L., Casane D.<\/strong> and R\u00e9taux S. (2023)<\/strong> Acoustic signatures in Mexican cavefish populations inhabiting different caves. PLoS ONE<\/em> 18(8):e0289574
\n<\/a> 71 – <\/strong>Legendre L., Rode J., Germon I., Pavie M., Quiviger C., Policarpo M., Leclercq J., Pere S., Fumey J., Hyacinthe C., Ornelas-Garcia P., Espinasa L., Retaux S. and Casane D.<\/strong> (2023)<\/strong> Genetic identification and reiterated captures suggests that the Astyanax mexicanus<\/em> El Pachon cavefish population is closed and declining. Zoological Research<\/em> 44(4): 701-711
\n<\/a> 70 – <\/strong> Syed A.S., Sharma K., Policarpo M., Ferrando S., Casane D.<\/strong> and Korsching S.I. (2023)<\/strong> Ancient and nonuniform loss of olfactory receptor expression renders the shark nose a de facto vomeronasal organ. Molecular Biology and Evolution<\/em> 40(4):msad076
\n<\/a> 69 – <\/strong> Policarpo M., Bemis K.E., Laurenti P., Legendre L., Sandoz J.C., R\u00e9taux S. and Casane D.<\/strong> (2022)<\/strong> Coevolution of the olfactory organ and its receptor repertoire in ray-finned fishes. BMC Biology<\/em> 20:195
\n<\/a> 68 – <\/strong> Van Helden J., Butler C.D., Achaz G., Canard B., Casane D.<\/strong>, Claverie J.-M., Colombo F., Courtier V., Ebright R.H., Graner F., Leitenberg M., Morand S., Petrovsky N., Segreto R., Decroly E., Halloy J. (2021)<\/strong> An appeal for an objective, open, and transparent scientific debate about the origin of SARS-CoV-2. The Lancet<\/em> 398(10309):1402\u20131404
\n![\"iconePdf\"](\"https:\/\/www.egce.universite-paris-saclay.fr\/wp-content\/uploads\/2014\/02\/iconePdf.png\")
<\/a> 67 – <\/strong> Policarpo M., Bemis K.E., Tyler J.C., Metcalfe C.J., Laurenti P., Sandoz J.C., R\u00e9taux S. and Casane D.<\/strong> (2021)<\/strong> Evolutionary dynamics of the OR gene repertoire in teleost fishes: evidence of an association with changes in olfactory epithelium shape. Molecular Biology and Evolution<\/em> 38(9):3742\u20133753
\n<\/a> 66 – <\/strong> Sallard E., Halloy J., Casane D.<\/strong>, Decroly E., van Helden J. (2021)<\/strong> Tracing the origins of SARS-COV-2 in coronavirus phylogenies: a review. Environmental Chemistry Letters<\/em> 19(2):769\u2013785
\n<\/a> 65 – <\/strong> Policarpo M., Fumey J., Lafargeas P., Naquin D., Thermes C., Naville M., Dechaud C., Volff J.-N., Cabau C., Klopp C., M\u00f8ller P.R., Bernatchez L., Garc\u00eda-Machado E., R\u00e9taux S. and Casane D. (2021)<\/strong> Contrasting gene decay in subterranean vertebrates: insights from cavefishes and fossorial mammals. Molecular Biology and Evolution<\/em> 38(2):589\u2013605
\n<\/a><\/strong> 64 – <\/strong> Hern\u00e1ndez D., M\u00f8ller P.R., Casane D.<\/strong> and Garc\u00eda-Machado E. (2020)<\/strong> A new species of the cave-fish genus Lucifuga<\/em> (Ophidiiformes, Bythitidae), from eastern Cuba. ZooKeys<\/em> 946:17-35
\n<\/a> 63 – <\/strong> Garc\u00eda-Machado E., Ponce de L\u00e9on J.L., Guti\u00e9rrez-Costa M.A., Michel-Salzat A., Germon I. and Casane D. (2020)<\/strong> Phylogeographic evidence that the distribution of cryptic euryhaline species in the Cuban Gambusia punctata<\/em> species group was shaped by the archipelago geological history. Molecular Phylogenetics and Evolution<\/em> 144:106712
\n<\/a> 62 – <\/strong> Ulmo-D\u00edaz G., Casane D.<\/strong>, Bernatchez L., Gonz\u00e1lez-D\u00edaz P., Apprill A., Castellanos-Gell J., Hern\u00e1ndez-Fern\u00e1ndez L. and Garc\u00eda-Machado E. (2018)<\/strong> Genetic differentiation in the mountainous star coral Orbicella faveolata<\/em> around Cuba. Coral Reefs<\/em> 37(4):1217-1227
\n<\/a> 61 – <\/strong> Fumey J., Hinaux H., Noirot C., Thermes C., R\u00e9taux S. and Casane D.<\/strong> (2018)<\/strong> Evidence of late Pleistocene origin of Astyanax mexicanus<\/em> cavefish. BMC Evolutionary Biology<\/em> 18(1):43
\n<\/a> 60 – <\/strong>Garc\u00eda-Machado E., Ulmo-D\u00edaz G., Castellanos-Gell J. and Casane D.<\/strong> (2018)<\/strong> Patterns of population connectivity in marine organisms around Cuba. Bulletin of Marine Science<\/em> 94(2):193-211
\n<\/a> 59 – <\/strong> Rodr\u00edguez-Machado S., Ponce de Le\u00f3n J.L., Casane D.<\/strong> and Garc\u00eda-Machado E. (2017)<\/strong> Morphology and genetics reveal the occurrence of Girardinus falcatus<\/em> (Eigenmann, 1903) (Cyprinodontiformes, Poeciliidae) in eastern Cuba. Check List<\/em> 13(6):1059-1065
\n<\/a> 58 – <\/strong>Ulmo-D\u00edaz G., Castellanos-Gell J., Ponce de Le\u00f3n J.L., Casane D.<\/strong>, Hurtado A. and Garc\u00eda-Machado E. (2016)<\/strong> Evidence of very low genetic diversity of Cuban gar (Atractosteus tristoechus<\/em>). Revista Investigaciones Marinas<\/em> 36(1):16-23
\n<\/a> 57 – <\/strong>Castellanos-Gell J., Robainas-Barcia A., Pina-Amarg\u00f3s F., Chevalier-Monteagudo P., Metcalfe C., Franco Molina W., Casane D.<\/strong> and Garc\u00eda-Machado E. (2016)<\/strong> Genetic diversity of reef fishes around Cuba: A multi-species assessment. Marine Biology<\/em> 163:165
\n<\/a> 56 – <\/strong>Casane D.<\/strong> and R\u00e9taux S. (2016)<\/strong> Evolutionary genetics of the cavefish Astyanax mexicanus<\/em>. Advances in Genetics<\/em> 95:117-159
\n<\/a> 55 – <\/strong>Hern\u00e1ndez D., Casane D.<\/strong>, Chevalier-Monteagudo P., Bernatchez L. and Garc\u00eda-Machado E. (2016)<\/strong> Go West: A one way stepping-stone dispersion model for the cavefish Lucifuga dentata<\/em> in western Cuba. PLoS ONE<\/em> 11(4):e0153545
\n<\/a> 54 – <\/strong>Shone V., Oulion S., Casane D.<\/strong>, Laurenti P. and Graham A. (2016)<\/strong> Mode of reduction in the number of pharyngeal segments within the sarcopterygians. Zoological Letters<\/em> 2:6
\n<\/a> 53 – <\/strong>Debiais-Thibaud M., Chiori R., Enault S., Oulion S., Germon I., Martinand-Mari C., Casane D.<\/strong> and Borday-Birraux V. (2015)<\/strong> Tooth and scale morphogenesis in shark: an alternative process to the mammalian enamel knot system. BMC Evolutionary Biology<\/em> 15(1):292
\n<\/a> 52 – <\/strong>Naville M., Chalopin D., Casane D.<\/strong>, Laurenti P. and Volff J.-N. (2015)<\/strong> The coelacanth: can a \u201cliving fossil\u201d have active transposable elements in its genome? Mobile Genetic Elements<\/em> 5(4):55-59
\n<\/a> 51 – <\/strong>Hinaux H., Blin M., Fumey J., Legendre L., Heuz\u00e9 A., Casane D.<\/strong> and R\u00e9taux S. (2015)<\/strong> Lens defects in Astyanax mexicanus<\/em> cavefish: evolution of crystallins and a role for alphaA-crystallin. Developmental Neurobiology<\/em> 75(5):505\u2013521
\n<\/a> 50 – <\/strong>Ponce de Le\u00f3n J.L., Le\u00f3n-Final\u00e9 G., Rodr\u00edguez-Silva R., Metcalfe C.J., Hern\u00e1ndez D., Casane D.<\/strong> and Garcia-Machado E. (2014)<\/strong> Phylogeography of Cuban Rivulus: evidence for allopatric speciation and secondary dispersal across a marine barrier. Molecular Phylogenetics and Evolution<\/em> 79:404-414
\n<\/a> 49 – <\/strong>Metcalfe C.J. and Casane D.<\/strong> (2014)<\/strong> Modular organization and reticulate evolution of the ORF1 of Jockey superfamily transposable elements. Mobile DNA<\/em> 5:19
\n<\/a> 48 – <\/strong>R\u00e9taux S. and Casane D.<\/strong> (2013)<\/strong> Evolution of development in the darkness of caves: Adaptation, drift or both? EvoDevo<\/em> 4(1):26
\n<\/a>47 – <\/strong>Debiais-Thibaud M., Metcalfe C.J., Pollack J., Germon I., Ekker M., Depew M., Laurenti P., Borday-Birraux V. and Casane D.<\/strong> (2013)<\/strong> Heterogeneous conservation of Dlx paralog co-expression in jawed vertebrates. PLoS ONE<\/em> 8(6):e68182
\n<\/a>46 – <\/strong>Pradel A., Didier D., Casane D.<\/strong>, Tafforeau P. and Maisey J.G. (2013)<\/strong> Holocephalan embryo provides new information on the evolution of the glossopharyngeal nerve, metotic fissure and parachordal plate in gnathostomes. PLoS ONE<\/em> 8(6):e66988
\n<\/a>45 <\/strong>– Metcalfe C.J. and Casane D.<\/strong> (2013)<\/strong> Accommodating the load: The transposable element content of very large genomes. Mobile Genetic Elements<\/em> 3(2):e24775
\n<\/a>44 \u2013 <\/strong>Compagnucci C., Debiais-Thibaud M., Coolen M., Fish J., Griffin J., Bertocchini F. Minoux M., Rijli F.M., Borday-Birraux V., Casane D.<\/strong>, Mazan S. and Depew M.J. (2013)<\/strong> Pattern and Polarity in the Development and Evolution of the Gnathostome Jaw: Both Conservation and Heterotopy in the Branchial Arches of the Shark, Scyliorhinus canicula<\/em>. Developmental Biology<\/em> 377(2):428-448
\n<\/a>43 – <\/strong>Da Lage J.-L., Binder M., Hua-Van A., Jane\u010dek \u0160. and Casane D.<\/strong> (2013)<\/strong> Gene make-up: rapid and massive intron gains after horizontal transfer of a bacterial \u03b1-amylase gene to Basidiomycetes. BMC Evolutionary Biology<\/em> 13:40
\n<\/a>42 – Casane D.<\/strong> and Laurenti P. (2013)<\/strong> Why coelacanths are not \u00ab living fossils \u00bb. BioEssays<\/em> 35(4):332-338
\n<\/a>41 – <\/strong>Hinaux H., Poulain J., Da Silva C., Noirot C., Jeffery W.R., Casane D.<\/strong> and R\u00e9taux S. (2013)<\/strong> De novo<\/em> sequencing of Astyanax mexicanus<\/em> surface fish and Pach\u00f3n cavefish transcriptomes reveals enrichment of mutations in cavefish putative eye genes. PLoS ONE<\/em> 8(1):e53553
\n<\/a>40 <\/strong>– Metcalfe C.J., Fil\u00e9e J., Germon I., Joss J.M.P. and Casane D.<\/strong> (2012)<\/strong> Evolution of the Australian lungfish (Neoceratodus forsteri<\/em>) genome: a major role for CR1 and L2 LINE elements. Molecular Biology and Evolution<\/em> 29(11):3529-3539
\n<\/a>39 <\/strong>– Castellanos-Gell J., Robainas-Barcia A., Casane D.<\/strong>, Chevalier-Monteagudo P., Pina-Amarg\u00f3s F. and Garc\u00eda-Machado E. (2012)<\/strong> The surgeonfish, Acanthurus bahianus<\/em>, has crossed the Amazon \u2013 Orinoco outflow barrier. Marine Biology<\/em> 159(7):1561-1565
\n<\/a>38 – <\/strong>Griffiths A.M., Jacoby D.M.P., Casane D.<\/strong>, McHugh M., Genner M.J. and Sims D.W. (2012)<\/strong> First analysis of multiple paternity in an oviparous shark species, the small-spotted catshark (Scyliorhinus canicula<\/em> L.).