{"id":4561,"date":"2015-01-22T14:13:04","date_gmt":"2015-01-22T13:13:04","guid":{"rendered":"https:\/\/www.egce.universite-paris-saclay.fr\/?p=4561"},"modified":"2015-01-22T14:13:04","modified_gmt":"2015-01-22T13:13:04","slug":"nicolas-pollet-2","status":"publish","type":"post","link":"https:\/\/www.egce.universite-paris-saclay.fr\/?p=4561&lang=en","title":{"rendered":"Nicolas Pollet"},"content":{"rendered":"

Researcher<\/strong>\"portrait_np\"<\/a><\/p>\n

Member of : Polygnome<\/p>\n

Tel. 33 1 69 15 65 93<\/p>\n

Fax 33 1 69 82 37 36<\/p>\n

Nicolas.Pollet@universite-paris-saclay.fr<\/p>\n

Research themes<\/h2>\n

Genomics – Amphibians – Evolution – Transposon – Xenopus – Bioinformatics – Development<\/p>\n

Publications<\/strong><\/h2>\n

\"Capture<\/a>\"Capture<\/a><\/p>\n

\"Capture<\/a><\/p>\n

2021<\/strong><\/p>\n

    \n
  1. Gut microbial ecology of Xenopus<\/em> tadpoles across life stages.<\/a> Scalvenzi, T., Clavereau, I., Bourge, M. and Pollet, N.<\/strong> (2021) bioRxiv, 2020.05.25.110734, ver. 4 peer reviewed and recommended by Peer community in Genomics.<\/em> https:\/\/doi.org\/10.1101\/2020.05.25.110734 https:\/\/doi.org\/10.24072\/pci.genomics.100005<\/li>\n
  2. Transcriptomic analysis of the trade-off between endurance and burst-performance in the frog Xenopus allofraseri<\/em>.<\/a> Ducret, V., Richards, A.J., Videlier, M., Scalvenzi, T., Moore, K.A., Paszkiewicz, K., Bonneaud, C., Pollet, N.<\/strong> and Herrel, A. (2021) BMC Genomics<\/em>\u00a0 22(1):204. doi: 10.1186\/s12864-021-07517-1.<\/li>\n
  3. Draft nuclear genome and complete mitogenome of the Mediterranean corn borer, Sesamia nonagrioides, a major pest of maize.<\/a> Muller, H., Ogereau, D., Da-Lage, J.L., Capdevielle, C., Pollet, N., Fortuna, T., Jeannette, R., Kaiser, L. and Gilbert, C. (2021) doi: 10.1093\/g3journal\/jkab155 G3 (Bethesda).\u00a0 11(7):jkab155.<\/li>\n<\/ol>\n

    2020<\/strong><\/p>\n

      \n
    1. A new method for long-read sequencing of animal mitochondrial genomes: application to the identification of equine mitochondrial DNA variants. <\/a> Dhorne-Pollet, S., Barrey, E. and Pollet, N.<\/strong> (2020) BMC Genomics<\/em> 21(1):785. doi: 10.1186\/s12864-020-07183-9.<\/span>\n
      <\/div>\n<\/li>\n
    2. Evolutionary Dynamics of the Repetitive DNA in the Karyotypes of Pipa carvalhoi<\/em> and Xenopus tropicalis<\/em> (Anura, Pipidae).<\/a> (2020) Zattera ML, Gazolla CB, Soares AA, Gazoni T, Pollet N<\/b>, Recco-Pimentel SM, Bruschi DP.<\/span> Front Genet.<\/em>\u00a0 11:637. doi: 10.3389\/fgene.2020.00637. eCollection 2020.<\/span><\/li>\n
    3. Ancient Adaptive Lateral Gene Transfers in the Symbiotic Opalina-Blastocystis Stramenopile Lineage.<\/a> (2020) Yubuki N, Galindo LJ, Reboul G, L\u00f3pez-Garc\u00eda P, Brown MW, Pollet N<\/b>, Moreira D. <\/span>Mol Biol Evol.<\/em>\u00a0 37(3):651-659. doi: 10.1093\/molbev\/msz250.<\/span><\/li>\n<\/ol>\n

      2017<\/strong><\/p>\n

        \n
      1. Bronchain, O. J., A. Chesneau, A. H. Monsoro-Burq, P. Jolivet, E. Paillard, T. S. Scanlan, B. A. Demeneix, L. M. Sachs & N. Pollet<\/b> (2017) Implication of thyroid hormone signaling in neural crest cells migration: Evidence from thyroid hormone receptor beta knockdown and NH3 antagonist studies. Molecular and Cellular Endocrinology,<\/i> 439,<\/b> 233-246. 10.1016\/j.mce.2016.09.007.<\/li>\n
      2. Maharana, S. K., N. Pollet<\/b> & G. Schlosser (2017) Identification of novel cis-regulatory elements of Eya1 in Xenopus laevis<\/i> using BAC recombineering. Scientific Reports,<\/i> 7,<\/b> 11. 10.1038\/s41598-017-15153-7.<\/li>\n
      3. Spirhanzlova, P., S. Dhorne-Pollet, J. S. Fellah, C. Da Silva, T. Tlapakova, K. Labadie, J. Weissenbach, J. Poulain, T. Jaffredo, P. Wincker, V. Krylov & N. Pollet<\/b> (2017) Construction and characterization of a BAC library for functional genomics in Xenopus tropicalis<\/i>. Developmental Biology,<\/i> 426,<\/b> 255-260. 10.1016\/j.ydbio.2016.05.015.<\/li>\n<\/ol>\n

        2016<\/strong><\/p>\n

          \n
        1. Tissier, J., J. C. Rage, R. Boistel, V. Fernandez, N. Pollet<\/b>, G. Garcia & M. Laurin (2016) Synchrotron analysis of a ‘mummified’ salamander (Vertebrata: Caudata) from the Eocene of Quercy, France. Zoological Journal of the Linnean Society,<\/i> 177,<\/b> 147-164.<\/li>\n<\/ol>\n

          2015<\/strong><\/p>\n

            \n
          1. Vouillot, L., Th\u00e9lie, A. and Pollet N.<\/strong> (2015) Comparison of T7E1 and Surveyor Mismatch Cleavage Assays To Detect Mutations Triggered by Engineered Nucleases. G3<\/strong> (Bethesda). doi: 10.1534\/g3.114.015834.<\/li>\n
          2. Colombo, B.M., Scalvenzi, T., Benlamara, S. and Pollet, N<\/b>. (2015) Microbiota and mucosal immunity in amphibians. Front Immunol<\/span><\/strong>.\u00a0 6:111. doi: 10.3389\/fimmu.2015.00111.<\/li>\n
          3. Tissier, J., Rage, J.C., Boistel, R., Fernandez, V., Pollet, N.<\/strong>, G Garcia, G. and Laurin, M. (2015) Synchrotron analysis of a \u2018mummified\u2019 salamander (Vertebrata: Caudata) from the Eocene of Quercy, France. <\/span>Zoological Journal of the Linnean Society<\/strong> in press doi:\u00a010.1111\/zoj.12341.<\/li>\n<\/ol>\n

            2014<\/strong><\/p>\n

              \n
            1. Plouhinec, J.L., Roche, D.D., Pegoraro, C., Figueiredo, A.L., Maczkowiak, F., Brunet, L.J., Milet, C., Vert, J.P., Pollet, N.<\/strong>, Harland, R.M., Monsoro-Burq, A.H. (2014) Pax3 and Zic1 trigger the early neural crest gene regulatory network by the direct activation of multiple key neural crest specifiers. Dev Biol<\/em><\/strong>. 386:461-72.<\/li>\n
            2. Scalvenzi, T. and Pollet, N. (2014) Insights on genome size evolution from a miniature inverted repeat transposon driving a satellite DNA. Mol. Phyl. Evol. <\/strong>81:1-9<\/li>\n<\/ol>\n

              2013<\/strong><\/p>\n

                \n
              1. Boistel, R., Aubin, T., Cloetens, P., Peyrin, F., Scotti, T., Herzog, P., Gerlach, J., Pollet<\/strong>, , Aubry, J.F. (2013) How minute sooglossid frogs hear without a middle ear. Proc Natl Acad Sci U S A<\/em><\/strong> 110:15360-4.<\/li>\n
              2. Dhorne-Pollet, S., Th\u00e9lie, A., Pollet, N. <\/strong>(2013) Validation of novel reference genes for RT-qPCR studies of gene expression in Xenopus tropicalis during embryonic and post-embryonic development. Dev Dyn.<\/em><\/strong> 242:709-17.<\/li>\n<\/ol>\n

                2012<\/strong><\/p>\n

                  \n
                1. Sinzelle, L<\/strong>., Thuret, R., Hwang, H.Y., Herszberg, B., Paillard, E., Bronchain, O.J.,<\/strong> Stemple, D.L., Dhorne-Pollet, S. and Pollet, N<\/strong>. (2012) Characterization of a novel Xenopus tropicalis<\/em> cell line as a model for in vitro<\/em> Genesis<\/em><\/strong> 50:316-24.<\/li>\n
                2. Planson, A.G., Carbonell, P., Paillard, E., Pollet, N.<\/strong> and Faulon, J.L. (2012) Compound toxicity screening and structure-activity relationship modeling in Escherichia coli<\/em>. Biotechnol Bioeng<\/em><\/strong> 109:846-50 doi\u00a0: 10.1002\/bit.24356<\/li>\n
                3. Parain, K., Mazurier, N., Bronchain, O.J., Borday, C., Cabochette, P., Chesneau, A., Colozza, G., el Yakoubi, W., Hamdache, J., Gilchrist, M., Pollet, N.<\/strong> and Perron, M.\u00a0(2012). A large scale screen for neural stem cell markers in Xenopus<\/em> retina. Developmental Neurobiology<\/em><\/strong>. 72:491-506.<\/li>\n
                4. Tempel, S., Pollet, N<\/strong>. and Tahi, F. (2012) ncRNAclassifier: a tool for detection and classification of transposable element sequences in RNA hairpins. BMC Bioinformatics<\/em><\/strong>. 13:246.<\/li>\n<\/ol>\n

                  \u00a0<\/strong><\/p>\n

                  2011<\/strong><\/p>\n

                    \n
                  1. Demattei, M-V., Hedhili, S., Sinzelle, L.,<\/strong> Bressac, C., Casteret, S., Moir\u00e9, N., Cambefort, J., Thomas, X., Pollet, N.,<\/strong> Gantet, P., and Bigot, Y. (2011) Nuclear Importation of Mariner Transposases among Eukaryotes\u00a0: Motif Requirements and Homo-Protein Interactions. PLoS ONE<\/em><\/strong> 6(8)\u00a0: e23693. doi:10.1371\/journal.pone.0023693<\/li>\n
                  2. Boistel, R., Aubin, T., Cloetens, P., Langer, M., Gillet, B., Josset, P., Pollet, N.<\/strong> and Herrel, A. (2011) Whispering to the Deaf\u00a0: Communication by a Frog without External Vocal Sac or Tympanum in Noisy Environments. PLoS ONE<\/em><\/strong> 6(7)\u00a0: e22080. doi:10.1371\/journal.pone.0022080<\/li>\n
                  3. Sinzelle, L., Carradec, Q., Paillard, E., Bronchain, O.J. and Pollet, N.<\/strong> (2011) Characterization of a Xenopus tropicalis<\/em><\/strong> Endogenous Retrovirus with Developmental and Stress-Dependent Expression. J Virol<\/em><\/strong> 85:2167-2179.<\/li>\n
                  4. Pegoraro, C., Pollet, N.<\/strong> and Monsoro-Burq AH. (2011) Tissue-specific expression of Sarcoplasmic\/Endoplasmic Reticulum Calcium ATPases (ATP2A\/SERCA) 1, 2, 3 during Xenopus laevis development. Gene Expr Patterns<\/em><\/strong> 11:122-8.<\/li>\n<\/ol>\n

                    2010<\/strong><\/p>\n

                      \n
                    1. Hellsten, U., Harland, R.M., Gilchrist, M.J., Hendrix, D., Jurka, ., Kapitonov, V., Ovcharenko, I., Putnam, N., Shu, S., Taher, L., Blitz, I., Blumberg, B., Dichann, D., Dubchak, I., Fletcher, R., Gerhard, D., Goodstein, D., Graves, T., Grigoriev, I., Grimwood, J., Kawashima, T., Lindquist, E., Mead, P., Mitros, T., Ota, Y., Poliakov, A., Pollet, N.<\/strong>, Robert, J., Salamov, A., Sater, A., Schmutz, J., Terry, A., Vize, P., Warren, W., Wells, D., Wills, A., Zimmerman, L., Grainger, R., Grammer, T., Khokha, M., Richardson, P. and Rokhsar, D. (2010) The genome of the western clawed frog Xenopus tropicalis. Science<\/strong><\/em> 328:633-6.<\/li>\n
                    2. Pollet, N. <\/strong>(2010) Expression of immune genes during metamorphosis of Xenopus<\/em>: a survey. Front Biosci<\/em>.<\/strong> 15:348-58.<\/li>\n
                    3. Ymlahi-Ouazzani, Q., Bronchain, O.J., Paillard, E., Ballagny, C., Chesneau, A., Jadaud, A., Mazabraud, A. and Pollet, N. <\/strong>(2010) Reduced levels of survival motor neuron protein leads to aberrant motoneuron growth in a Xenopus<\/em> model of muscular atrophy, Neurogenetics<\/em><\/strong>. 11\u00a0:27-40.<\/li>\n
                    4. Smelty, P., Marchal, C., Renard, R., Sinzelle, L., Pollet, N.<\/strong>, Dunon, D., Jaffredo, T., Sire, J-Y, Fellah, J.S. (2010) Identification of the pre\u2013T-cell receptor \u03b1 chain in nonmammalian vertebrates challenges the structure\u2013function of the molecule. Proc Natl Acad Sci U S A<\/em><\/strong> 107:19991-19996.<\/li>\n<\/ol>\n","protected":false},"excerpt":{"rendered":"

                      Researcher Member of : Polygnome Tel. 33 1 69 15 65 93 Fax 33 1 69 82 37 36 Nicolas.Pollet@universite-paris-saclay.fr Research themes Genomics – Amphibians – Evolution – Transposon – Xenopus – Bioinformatics – Development Publications 2021 Gut microbial ecology of Xenopus tadpoles across life stages. Scalvenzi, T., Clavereau, I., Bourge, M. and Pollet, N. […]<\/p>\n","protected":false},"author":1,"featured_media":0,"comment_status":"closed","ping_status":"closed","sticky":false,"template":"","format":"standard","meta":{"site-sidebar-layout":"default","site-content-layout":"","ast-site-content-layout":"default","site-content-style":"default","site-sidebar-style":"default","ast-global-header-display":"","ast-banner-title-visibility":"","ast-main-header-display":"","ast-hfb-above-header-display":"","ast-hfb-below-header-display":"","ast-hfb-mobile-header-display":"","site-post-title":"","ast-breadcrumbs-content":"","ast-featured-img":"","footer-sml-layout":"","ast-disable-related-posts":"","theme-transparent-header-meta":"","adv-header-id-meta":"","stick-header-meta":"","header-above-stick-meta":"","header-main-stick-meta":"","header-below-stick-meta":"","astra-migrate-meta-layouts":"default","ast-page-background-enabled":"default","ast-page-background-meta":{"desktop":{"background-color":"var(--ast-global-color-4)","background-image":"","background-repeat":"repeat","background-position":"center center","background-size":"auto","background-attachment":"scroll","background-type":"","background-media":"","overlay-type":"","overlay-color":"","overlay-opacity":"","overlay-gradient":""},"tablet":{"background-color":"","background-image":"","background-repeat":"repeat","background-position":"center center","background-size":"auto","background-attachment":"scroll","background-type":"","background-media":"","overlay-type":"","overlay-color":"","overlay-opacity":"","overlay-gradient":""},"mobile":{"background-color":"","background-image":"","background-repeat":"repeat","background-position":"center center","background-size":"auto","background-attachment":"scroll","background-type":"","background-media":"","overlay-type":"","overlay-color":"","overlay-opacity":"","overlay-gradient":""}},"ast-content-background-meta":{"desktop":{"background-color":"var(--ast-global-color-5)","background-image":"","background-repeat":"repeat","background-position":"center center","background-size":"auto","background-attachment":"scroll","background-type":"","background-media":"","overlay-type":"","overlay-color":"","overlay-opacity":"","overlay-gradient":""},"tablet":{"background-color":"var(--ast-global-color-5)","background-image":"","background-repeat":"repeat","background-position":"center center","background-size":"auto","background-attachment":"scroll","background-type":"","background-media":"","overlay-type":"","overlay-color":"","overlay-opacity":"","overlay-gradient":""},"mobile":{"background-color":"var(--ast-global-color-5)","background-image":"","background-repeat":"repeat","background-position":"center center","background-size":"auto","background-attachment":"scroll","background-type":"","background-media":"","overlay-type":"","overlay-color":"","overlay-opacity":"","overlay-gradient":""}},"_themeisle_gutenberg_block_has_review":false,"_jetpack_memberships_contains_paid_content":false,"footnotes":""},"categories":[11],"tags":[32,41,48],"class_list":["post-4561","post","type-post","status-publish","format-standard","hentry","category-personnels-en","tag-bioinformatics","tag-genomics","tag-xenopus"],"jetpack_featured_media_url":"","jetpack_sharing_enabled":true,"_links":{"self":[{"href":"https:\/\/www.egce.universite-paris-saclay.fr\/index.php?rest_route=\/wp\/v2\/posts\/4561","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.egce.universite-paris-saclay.fr\/index.php?rest_route=\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/www.egce.universite-paris-saclay.fr\/index.php?rest_route=\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/www.egce.universite-paris-saclay.fr\/index.php?rest_route=\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/www.egce.universite-paris-saclay.fr\/index.php?rest_route=%2Fwp%2Fv2%2Fcomments&post=4561"}],"version-history":[{"count":0,"href":"https:\/\/www.egce.universite-paris-saclay.fr\/index.php?rest_route=\/wp\/v2\/posts\/4561\/revisions"}],"wp:attachment":[{"href":"https:\/\/www.egce.universite-paris-saclay.fr\/index.php?rest_route=%2Fwp%2Fv2%2Fmedia&parent=4561"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/www.egce.universite-paris-saclay.fr\/index.php?rest_route=%2Fwp%2Fv2%2Fcategories&post=4561"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/www.egce.universite-paris-saclay.fr\/index.php?rest_route=%2Fwp%2Fv2%2Ftags&post=4561"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}