{"id":4556,"date":"2015-01-21T14:29:00","date_gmt":"2015-01-21T13:29:00","guid":{"rendered":"https:\/\/www.egce.universite-paris-saclay.fr\/?p=4556"},"modified":"2026-03-23T18:26:35","modified_gmt":"2026-03-23T17:26:35","slug":"nicolas-pollet","status":"publish","type":"post","link":"https:\/\/www.egce.universite-paris-saclay.fr\/?p=4556","title":{"rendered":"Nicolas Pollet"},"content":{"rendered":"\n
\"Portrait<\/figure>\n\n\n\n

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Directeur de Recherche<\/strong><\/p>\n\n\n\n

Membre de : Pole G\u00e9nome<\/p>\n\n\n\n

Nicolas.Pollet@universite-paris-saclay.fr<\/p>\n\n\n\n

 <\/h2>\n\n\n\n

Th\u00e8mes de recherche<\/h2>\n\n\n\n

G\u00e9nomique – Amphibiens – Evolution – X\u00e9nope – Bioinformatique – Transposon – Microbiome<\/p>\n\n\n\n

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Publications<\/strong><\/h2>\n\n\n\n

2026<\/strong><\/p>\n\n\n\n

    \n
  1. Sock Bell, A.J., Tchockang, P.T., Pollet, N., Denys, C., Tindo, M., Missoup, A.D.\u00a0Bat diversity and conservation issues in an unexplored forest of the Littoral region of Cameroon (West Central Africa): a morphological and molecular approach. Biodivers Conserv<\/em> 35<\/strong>, 114 (2026). 10.1007\/s10531-026-03287-y<\/li>\n<\/ol>\n\n\n\n

    2025<\/strong><\/p>\n\n\n\n

      \n
    1. Li Z, Pollet N. Impact of a horizontally transferred Helitron family on genome evolution in Xenopus laevis. Mob DNA. 2025 Apr 16;16(1):19. doi: 10.1186\/s13100-025-00356-x. <\/li>\n\n\n\n
    2. Levasseur M, Trac A, Clavereau I, Zannini F, Estevez Y, Amusant N, Gelhaye \u00c9, Pollet N, Hou\u00ebl E, Touboul D, Eparvier V. Reverse chemical ecology to study the defense of the plant host Sextonia rubra and the chemical mediators of its endophyte Fusarium falciforme against phytopathogen Trametes versicolor. Phytochemistry. 2025 Oct;238:114577. doi: 10.1016\/j.phytochem.2025.114577. <\/li>\n<\/ol>\n\n\n\n

      2024<\/strong><\/p>\n\n\n\n

        \n
      1. Li Z, Gilbert C, Peng H, Pollet N. Discovery of numerous novel Helitron-like elements in eukaryote genomes using HELIANO. Nucleic Acids Res. 2024 Sep 23;52(17):e79. doi: 10.1093\/nar\/gkae679.<\/li>\n\n\n\n
      2. Pollet, N., Legnouo, E.A.A., Clavereau,I., Bonneau, M., Kamgang, LR.,Le Gall, P. Observations of vertebrate and invertebrate predation on Gabonese Clawed Frogs, Xenopus mellotropicalis<\/em> Evans et al., 2015<\/a>. Herpetology Notes 17, 97-100<\/li>\n\n\n\n
      3. Tartu, S., Pollet, N., Clavereau, I., Gauthier Bouchard, G., Brischoux, F. (2024). Maternal body condition affects the response of larval spined toads\u2019 faecal microbiome to a widespread contaminant. bioRxiv,  ver. 2 peer-reviewed and recommended by Peer Community in Ecotoxicology and Environmental Chemistry. https:\/\/doi.org\/10.1101\/2023.12.18.57212<\/a><\/li>\n\n\n\n
      4. Lanoizelet M, Michel L, Lagadec R, Mayeur H, Guichard L, Logeux V, S\u00e9verac D, Martin K, Klopp C, Marcellini S, Castillo H, Pollet N, Candal E, Debiais-Thibaud M, Boisvert C, Billoud B, Schubert M, Blader P, Mazan S. Analysis of a shark reveals ancient, Wnt-dependent, habenular asymmetries in vertebrates. Nat Commun. 2024 15(1):10194. doi: 10.1038\/s41467-024-54042-2. <\/li>\n<\/ol>\n\n\n\n

        <\/p>\n\n\n\n

        2022<\/strong><\/p>\n\n\n\n

          \n
        1. Combining OSMAC, metabolomic and genomic methods for the production and annotation of halogenated azaphilones and ilicicolins in termite symbiotic fungi. (2022) Hebra, T., Pollet, N.<\/strong>, Touboul, D. and Eparvier, V. Rep.<\/strong> 12(1):173210. doi:10.1038\/s41598-022-22256-3.<\/li>\n\n\n\n
        2. What complete mitochondrial genomes tell us about the evolutionary history of the black soldier fly, Hermetia illucens<\/em>. (2022) Guilliet, J.,<\/strong> Baudouin, G., Pollet, N.<\/strong> and Fil\u00e9e, J<\/u>. BMC Ecol Evol.<\/strong> 22(1):72. doi: 10.1186\/s12862-022-02025-6.<\/li>\n<\/ol>\n\n\n\n

          2021<\/strong><\/p>\n\n\n\n

            \n
          1. Gut microbial ecology of Xenopus<\/em> tadpoles across life stages.<\/a> Scalvenzi, T., Clavereau, I., Bourge, M. and Pollet, N.<\/strong> (2021) 10.24072\/pcjournal.53 – Peer Community Journal<\/em>, Volume 1 (2021), article no. e41.<\/li>\n\n\n\n
          2. Transcriptomic analysis of the trade-off between endurance and burst-performance in the frog Xenopus allofraseri<\/em>.<\/a> Ducret, V., Richards, A.J., Videlier, M., Scalvenzi, T., Moore, K.A., Paszkiewicz, K., Bonneaud, C., Pollet, N.<\/strong> and Herrel, A. (2021) BMC Genomics<\/em>  22(1):204. doi: 10.1186\/s12864-021-07517-1.<\/li>\n\n\n\n
          3. \n
            Draft nuclear genome and complete mitogenome of the Mediterranean corn borer, Sesamia nonagrioides, a major pest of maize.<\/a> Muller, H., Ogereau, D., Da-Lage, J.L., Capdevielle, C., Pollet, N., Fortuna, T., Jeannette, R., Kaiser, L. and Gilbert, C. (2021) doi: 10.1093\/g3journal\/jkab155 G3 (Bethesda).  11(7):jkab155.<\/div>\n<\/li>\n<\/ol>\n\n\n\n

            2020<\/strong><\/p>\n\n\n\n

              \n
            1. A new method for long-read sequencing of animal mitochondrial genomes: application to the identification of equine mitochondrial DNA variants. <\/a> Dhorne-Pollet, S., Barrey, E. and Pollet, N.<\/strong> (2020) BMC Genomics<\/em> 21(1):785. doi: 10.1186\/s12864-020-07183-9.<\/span><\/li>\n\n\n\n
            2. Evolutionary Dynamics of the Repetitive DNA in the Karyotypes of Pipa carvalhoi<\/em> and Xenopus tropicalis<\/em> (Anura, Pipidae).<\/a> (2020) Zattera ML, Gazolla CB, Soares AA, Gazoni T, Pollet N<\/b>, Recco-Pimentel SM, Bruschi DP.<\/span> Front Genet.<\/em>  11:637. doi: 10.3389\/fgene.2020.00637. eCollection 2020.<\/span><\/li>\n\n\n\n
            3. Ancient Adaptive Lateral Gene Transfers in the Symbiotic Opalina-Blastocystis Stramenopile Lineage.<\/a> (2020) Yubuki N, Galindo LJ, Reboul G, L\u00f3pez-Garc\u00eda P, Brown MW, Pollet N<\/b>, Moreira D. <\/span>Mol Biol Evol.<\/em>  37(3):651-659. doi: 10.1093\/molbev\/msz250.<\/span><\/li>\n<\/ol>\n\n\n\n

              2017<\/strong><\/p>\n\n\n\n

                \n
              1. Bronchain, O. J., A. Chesneau, A. H. Monsoro-Burq, P. Jolivet, E. Paillard, T. S. Scanlan, B. A. Demeneix, L. M. Sachs & N. Pollet<\/b> (2017) Implication of thyroid hormone signaling in neural crest cells migration: Evidence from thyroid hormone receptor beta knockdown and NH3 antagonist studies. Molecular and Cellular Endocrinology,<\/i> 439,<\/b> 233-246. 10.1016\/j.mce.2016.09.007.<\/li>\n\n\n\n
              2. Maharana, S. K., N. Pollet<\/b> & G. Schlosser (2017) Identification of novel cis-regulatory elements of Eya1 in Xenopus laevis<\/i> using BAC recombineering. Scientific Reports,<\/i> 7,<\/b> 11. 10.1038\/s41598-017-15153-7.<\/li>\n\n\n\n
              3. Spirhanzlova, P., S. Dhorne-Pollet, J. S. Fellah, C. Da Silva, T. Tlapakova, K. Labadie, J. Weissenbach, J. Poulain, T. Jaffredo, P. Wincker, V. Krylov & N. Pollet<\/b> (2017) Construction and characterization of a BAC library for functional genomics in Xenopus tropicalis<\/i>. Developmental Biology,<\/i> 426,<\/b> 255-260. 10.1016\/j.ydbio.2016.05.015.<\/li>\n<\/ol>\n\n\n\n

                2016<\/strong><\/p>\n\n\n\n

                  \n
                1. Spirhanzlova, P., Dhorne-Pollet, S., Fellah, J.S., Da Silva, C., Tlapakova, T., Labadie, K., Weissenbach, J., Poulain, J., Jaffredo, T., Wincker, P., Krylov, V., Pollet, N.<\/strong> (2016) Construction and characterization of a BAC library for functional genomics in Xenopus tropicalis<\/em>. Dev Biol<\/strong>.426:255-260  doi: 10.1016\/j.ydbio.2016.05.015.<\/li>\n\n\n\n
                2. Bronchain, O.J., Chesneau, A., Monsoro-Burq, A.-H., Jolivet, P., Paillard, E., Scanlan, T.S., Demeneix, B.A., Sachs, L.M., Pollet, N.<\/strong> (2016) Implication of thyroid hormone signaling in neural crest cells migration: Evidence from thyroid hormone receptor beta knockdown and NH3 antagonist studies. Molecular and Cellular Endocrinology<\/strong> 439:233-246. doi: 10.1016\/j.mce.2016.09.007 .<\/li>\n\n\n\n
                3. Tissier, J., J. C. Rage, R. Boistel, V. Fernandez, N. Pollet<\/b>, G. Garcia & M. Laurin (2016) Synchrotron analysis of a ‘mummified’ salamander (Vertebrata: Caudata) from the Eocene of Quercy, France. Zoological Journal of the Linnean Society,<\/i> 177,<\/b> 147-164.<\/li>\n<\/ol>\n\n\n\n

                  2015<\/strong><\/p>\n\n\n\n

                    \n
                  1. Vouillot, L., Th\u00e9lie, A. and Pollet N.<\/strong> (2015) Comparison of T7E1 and Surveyor Mismatch Cleavage Assays To Detect Mutations Triggered by Engineered Nucleases. G3<\/strong> (Bethesda). doi: 10.1534\/g3.114.015834.<\/li>\n\n\n\n
                  2. Colombo, B.M., Scalvenzi, T., Benlamara, S. and Pollet, N<\/b>. (2015) Microbiota and mucosal immunity in amphibians. Front Immunol<\/span><\/strong>.  6:111. doi: 10.3389\/fimmu.2015.00111.<\/li>\n\n\n\n
                  3. Tissier, J., Rage, J.C., Boistel, R., Fernandez, V., Pollet, N.<\/strong>, G Garcia, G. and Laurin, M. (2015) Synchrotron analysis of a \u2018mummified\u2019 salamander (Vertebrata: Caudata) from the Eocene of Quercy, France. <\/span>Zoological Journal of the Linnean Society<\/strong> 177:147-164 doi: 10.1111\/zoj.12341.<\/li>\n<\/ol>\n\n\n\n

                    2014<\/strong><\/p>\n\n\n\n

                      \n
                    1. Plouhinec, J.L., Roche, D.D., Pegoraro, C., Figueiredo, A.L., Maczkowiak, F., Brunet, L.J., Milet, C., Vert, J.P., Pollet, N.<\/strong>, Harland, R.M., Monsoro-Burq, A.H. (2014) Pax3 and Zic1 trigger the early neural crest gene regulatory network by the direct activation of multiple key neural crest specifiers. Dev. Biol<\/em><\/strong>. 386:461-72.<\/li>\n\n\n\n
                    2. Scalvenzi, T. and Pollet, N.<\/strong> (2014) Insights on genome size evolution from a miniature inverted repeat transposon driving a satellite DNA. Mol. Phyl. Evol. <\/strong>81:1-9<\/li>\n<\/ol>\n\n\n\n

                      2013<\/strong><\/p>\n\n\n\n

                        \n
                      1. Boistel, R., Aubin, T., Cloetens, P., Peyrin, F., Scotti, T., Herzog, P., Gerlach, J., Pollet<\/strong>, , Aubry, J.F. (2013) How minute sooglossid frogs hear without a middle ear. Proc Natl Acad Sci U S A<\/em><\/strong> 110:15360-4.<\/li>\n\n\n\n
                      2. Dhorne-Pollet, S., Th\u00e9lie, A., Pollet, N. <\/strong>(2013) Validation of novel reference genes for RT-qPCR studies of gene expression in Xenopus tropicalis during embryonic and post-embryonic development. Dev Dyn.<\/em><\/strong> 242:709-17.<\/li>\n<\/ol>\n\n\n\n

                        2012<\/strong><\/p>\n\n\n\n

                          \n
                        1. Sinzelle, L<\/strong>., Thuret, R., Hwang, H.Y., Herszberg, B., Paillard, E., Bronchain, O.J.,<\/strong> Stemple, D.L., Dhorne-Pollet, S. and Pollet, N<\/strong>. (2012) Characterization of a novel Xenopus tropicalis<\/em> cell line as a model for in vitro<\/em> Genesis<\/em><\/strong> 50:316-24.<\/li>\n\n\n\n
                        2. Planson, A.G., Carbonell, P., Paillard, E., Pollet, N.<\/strong> and Faulon, J.L. (2012) Compound toxicity screening and structure-activity relationship modeling in Escherichia coli<\/em>. Biotechnol Bioeng<\/em><\/strong> 109:846-50 doi : 10.1002\/bit.24356<\/li>\n\n\n\n
                        3. Parain, K., Mazurier, N., Bronchain, O.J., Borday, C., Cabochette, P., Chesneau, A., Colozza, G., el Yakoubi, W., Hamdache, J., Gilchrist, M., Pollet, N.<\/strong> and Perron, M. (2012). A large scale screen for neural stem cell markers in Xenopus<\/em> retina. Developmental Neurobiology<\/em><\/strong>. 72:491-506.<\/li>\n\n\n\n
                        4. Tempel, S., Pollet, N<\/strong>. and Tahi, F. (2012) ncRNAclassifier: a tool for detection and classification of transposable element sequences in RNA hairpins. BMC Bioinformatics<\/em><\/strong>. 13:246.<\/li>\n<\/ol>\n\n\n\n

                          2011<\/strong><\/p>\n\n\n\n

                            \n
                          1. Demattei, M-V., Hedhili, S., Sinzelle, L.,<\/strong> Bressac, C., Casteret, S., Moir\u00e9, N., Cambefort, J., Thomas, X., Pollet, N.,<\/strong> Gantet, P., and Bigot, Y. (2011) Nuclear Importation of Mariner Transposases among Eukaryotes : Motif Requirements and Homo-Protein Interactions. PLoS ONE<\/em><\/strong> 6(8) : e23693. doi:10.1371\/journal.pone.0023693<\/li>\n\n\n\n
                          2. Boistel, R., Aubin, T., Cloetens, P., Langer, M., Gillet, B., Josset, P., Pollet, N.<\/strong> and Herrel, A. (2011) Whispering to the Deaf : Communication by a Frog without External Vocal Sac or Tympanum in Noisy Environments. PLoS ONE<\/em><\/strong> 6(7) : e22080. doi:10.1371\/journal.pone.0022080<\/li>\n\n\n\n
                          3. Sinzelle, L., Carradec, Q., Paillard, E., Bronchain, O.J. and Pollet, N.<\/strong> (2011) Characterization of a Xenopus tropicalis<\/em><\/strong> Endogenous Retrovirus with Developmental and Stress-Dependent Expression. J Virol<\/em><\/strong> 85:2167-2179.<\/li>\n\n\n\n
                          4. Pegoraro, C., Pollet, N.<\/strong> and Monsoro-Burq AH. (2011) Tissue-specific expression of Sarcoplasmic\/Endoplasmic Reticulum Calcium ATPases (ATP2A\/SERCA) 1, 2, 3 during Xenopus laevis development. Gene Expr Patterns<\/em><\/strong> 11:122-8.<\/li>\n<\/ol>\n\n\n\n

                            2010<\/strong><\/p>\n\n\n\n

                              \n
                            1. Hellsten, U., Harland, R.M., Gilchrist, M.J., Hendrix, D., Jurka, ., Kapitonov, V., Ovcharenko, I., Putnam, N., Shu, S., Taher, L., Blitz, I., Blumberg, B., Dichann, D., Dubchak, I., Fletcher, R., Gerhard, D., Goodstein, D., Graves, T., Grigoriev, I., Grimwood, J., Kawashima, T., Lindquist, E., Mead, P., Mitros, T., Ota, Y., Poliakov, A., Pollet, N.<\/strong>, Robert, J., Salamov, A., Sater, A., Schmutz, J., Terry, A., Vize, P., Warren, W., Wells, D., Wills, A., Zimmerman, L., Grainger, R., Grammer, T., Khokha, M., Richardson, P. and Rokhsar, D. (2010) The genome of the western clawed frog Xenopus tropicalis. Science<\/strong><\/em> 328:633-6.<\/li>\n\n\n\n
                            2. Pollet, N. <\/strong>(2010) Expression of immune genes during metamorphosis of Xenopus<\/em>: a survey. Front Biosci<\/em>.<\/strong> 15:348-58.<\/li>\n\n\n\n
                            3. Ymlahi-Ouazzani, Q., Bronchain, O.J., Paillard, E., Ballagny, C., Chesneau, A., Jadaud, A., Mazabraud, A. and Pollet, N. <\/strong>(2010) Reduced levels of survival motor neuron protein leads to aberrant motoneuron growth in a Xenopus<\/em> model of muscular atrophy, Neurogenetics<\/em><\/strong>. 11 :27-40.<\/li>\n\n\n\n
                            4. Smelty, P., Marchal, C., Renard, R., Sinzelle, L., Pollet, N.<\/strong>, Dunon, D., Jaffredo, T., Sire, J-Y, Fellah, J.S. (2010) Identification of the pre\u2013T-cell receptor \u03b1 chain in nonmammalian vertebrates challenges the structure\u2013function of the molecule. Proc Natl Acad Sci U S A<\/em><\/strong> 107:19991-19996.<\/li>\n<\/ol>\n\n\n\n

                              Photos<\/strong><\/p>\n\n\n\n

                              Ecole de terrain Ecotrop 2019 \u00ab\u00a0Hommes et biodiversit\u00e9\u00a0\u00bb \u00e0 Mbalmayo au Cameroun.<\/a><\/p>\n\n\n\n

                              <\/p>\n","protected":false},"excerpt":{"rendered":"

                              Directeur de Recherche Membre de : Pole G\u00e9nome Nicolas.Pollet@universite-paris-saclay.fr   Th\u00e8mes de recherche G\u00e9nomique – Amphibiens – Evolution – X\u00e9nope – Bioinformatique – Transposon – Microbiome Publications 2026 2025 2024 2022 2021 2020 2017 2016 2015 2014 2013 2012 2011 2010 Photos Ecole de terrain Ecotrop 2019 \u00ab\u00a0Hommes et biodiversit\u00e9\u00a0\u00bb \u00e0 Mbalmayo au Cameroun.<\/p>\n","protected":false},"author":79,"featured_media":0,"comment_status":"closed","ping_status":"closed","sticky":false,"template":"","format":"standard","meta":{"site-sidebar-layout":"default","site-content-layout":"","ast-site-content-layout":"default","site-content-style":"default","site-sidebar-style":"default","ast-global-header-display":"","ast-banner-title-visibility":"","ast-main-header-display":"","ast-hfb-above-header-display":"","ast-hfb-below-header-display":"","ast-hfb-mobile-header-display":"","site-post-title":"","ast-breadcrumbs-content":"","ast-featured-img":"","footer-sml-layout":"","ast-disable-related-posts":"","theme-transparent-header-meta":"","adv-header-id-meta":"","stick-header-meta":"","header-above-stick-meta":"","header-main-stick-meta":"","header-below-stick-meta":"","astra-migrate-meta-layouts":"set","ast-page-background-enabled":"default","ast-page-background-meta":{"desktop":{"background-color":"var(--ast-global-color-4)","background-image":"","background-repeat":"repeat","background-position":"center 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